Simple Agreement Analysis

Usage

jmvagree(
  data,
  method1,
  method2,
  ciWidth = 95,
  agreeWidth = 95,
  testValue = 2,
  CCC = TRUE,
  plotbland = TRUE,
  plotcon = FALSE,
  plotcheck = FALSE,
  prop_bias = FALSE,
  xlabel = "Average of Both Methods",
  ylabel = "Difference between Methods"
)

Arguments

data: Data
method1: Name of column containing 1st Vector of data
method2: Name of column containing Vector of data
ciWidth: a number between 50 and 99.9 (default: 95), the width of confidence intervals
agreeWidth: a number between 50 and 99.9 (default: 95), the width of agreement limits
testValue: a number specifying the limit of agreement
CCC: TRUE or FALSE (default), produce CCC table
plotbland: TRUE or FALSE (default), for Bland-Altman plot
plotcon: TRUE or FALSE (default), for Bland-Altman plot
plotcheck: TRUE or FALSE (default), assumptions plots
prop_bias: TRUE or FALSE
xlabel: The label for the x-axis on the BA plot
ylabel: The label for the y-axis on the BA plot

Value

A results object containing:

`results$text`					a html
`results$blandtab`					a table
`results$ccctab`					a table
`results$plotba`					an image
`results$plotcon`					an image
`results$plotcheck`					an image

Tables can be converted to data frames with asDF or as.data.frame. For example:

results$blandtab$asDF

as.data.frame(results$blandtab)